Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein, cxxc-cxxc | SAMEA1710551_01426 | Not Available | Positive | 1540615 - 1542465 | 72538.9 |
| crispr-associated autoregulator devr family protein | SAMEA1710551_01427 | Not Available | Positive | 1542467 - 1543381 | 34818.8 |
| crispr-associated cas5 family protein | SAMEA1710551_01428 | Not Available | Positive | 1543383 - 1544084 | 27278.4 |
| crispr-associated cas3 family helicase | SAMEA1710551_01429 | Not Available | Positive | 1544095 - 1546416 | 89781.3 |
| crispr-associated cas4 family protein | SAMEA1710551_01430 | Not Available | Positive | 1546413 - 1546982 | 22716.1 |
| crispr-associated cas1 family protein | SAMEA1710551_01431 | Not Available | Positive | 1546985 - 1547965 | 39274.3 |
| crispr-associated cas2 family protein | SAMEA1710551_01432 | Not Available | Positive | 1547968 - 1548234 | 10471.7 |
| uncharacterised protein | SAMEA1710551_01433 | Not Available | Positive | 1548718 - 1548885 | 6274.87 |
| acetyltransferase | SAMEA1710551_01434 | Not Available | Positive | 1550600 - 1551028 | 16496.9 |
| uncharacterised protein | SAMEA1710551_01435 | Not Available | Negative | 1551491 - 1552261 | 29860.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
