Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | SAMEA1710551_01376 | Not Available | Positive | 1488475 - 1489092 | 23389.3 |
| dna-directed rna polymerase subunit omega | SAMEA1710551_01377 | Not Available | Positive | 1489095 - 1489361 | 10168.0 |
| coenzyme a biosynthesis bifunctional protein | SAMEA1710551_01378 | Not Available | Positive | 1489366 - 1490565 | 43735.1 |
| primosomal protein n' | SAMEA1710551_01379 | Not Available | Positive | 1490840 - 1493329 | 95389.7 |
| peptide deformylase 2 (pdf 2) (polypeptide deformylase 2) | SAMEA1710551_01380 | Not Available | Positive | 1493347 - 1493787 | 16275.8 |
| methionyl-trna formyltransferase | SAMEA1710551_01381 | Not Available | Positive | 1493802 - 1494731 | 34377.1 |
| protein of uncharacterised function duf116 | SAMEA1710551_01382 | Not Available | Positive | 1494741 - 1495493 | 27830.9 |
| metal-dependent peptidase | SAMEA1710551_01383 | Not Available | Positive | 1495562 - 1496263 | 25857.6 |
| 16s rrna methyltransferase b | SAMEA1710551_01384 | Not Available | Positive | 1496325 - 1497650 | 50555.2 |
| radical sam-family protein | SAMEA1710551_01385 | Not Available | Positive | 1497658 - 1498689 | 39506.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
