Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein | SAMEA1710551_01284 | Not Available | Negative | 1382482 - 1383435 | 34705.4 |
| permease | SAMEA1710551_01285 | Not Available | Negative | 1383936 - 1385270 | 47429.5 |
| 3-hydroxybutyrate dehydrogenase | SAMEA1710551_01286 | Not Available | Negative | 1385332 - 1386108 | 28096.2 |
| succinyl coa:3-oxoacid coa-transferase subunit b | SAMEA1710551_01287 | Not Available | Negative | 1386213 - 1386878 | 23039.9 |
| succinyl coa:3-oxoacid coa-transferase subunit a | SAMEA1710551_01288 | Not Available | Negative | 1386878 - 1387534 | 23426.2 |
| acetoacetyl-coa thiolase 2 | SAMEA1710551_01289 | Not Available | Negative | 1387543 - 1388721 | 41505.8 |
| lysr family transcriptional regulator | SAMEA1710551_01290 | Not Available | Positive | 1389074 - 1389976 | 35069.5 |
| abc transporter oligopeptide-family permease | SAMEA1710551_01291 | Not Available | Negative | 1390191 - 1391003 | 29800.5 |
| abc transporter oligopeptide-family permease | SAMEA1710551_01292 | Not Available | Negative | 1391006 - 1391965 | 35110.3 |
| oligopeptide abc transporter substrate-binding protein | SAMEA1710551_01293 | Not Available | Negative | 1392071 - 1393630 | 58191.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
