Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system lactose/cellobiose-family transporter subunit iic | SAMEA1710551_01264 | Not Available | Positive | 1360994 - 1362340 | 48915.8 |
| outer surface protein | SAMEA1710551_01265 | Not Available | Positive | 1362573 - 1363670 | 42457.1 |
| n-acetylmuramic acid 6-phosphate etherase | SAMEA1710551_01266 | Not Available | Positive | 1363769 - 1364683 | 33132.4 |
| badf/badg/bcra/bcrd type atpase | SAMEA1710551_01267 | Not Available | Positive | 1364793 - 1365644 | 31121.3 |
| uncharacterised protein | SAMEA1710551_01268 | Not Available | Negative | 1365823 - 1366140 | 12105.6 |
| uncharacterised protein | SAMEA1710551_01269 | Not Available | Positive | 1366552 - 1366731 | 6197.3 |
| uncharacterised protein | SAMEA1710551_01270 | Not Available | Negative | 1367053 - 1367202 | 5794.17 |
| sodium:dicarboxylate symporter | SAMEA1710551_01271 | Not Available | Positive | 1367634 - 1368842 | 41915.6 |
| aminotransferase | SAMEA1710551_01272 | Not Available | Negative | 1368950 - 1370026 | 40794.0 |
| hypoxanthine phosphoribosyltransferase | SAMEA1710551_01273 | Not Available | Positive | 1370255 - 1370782 | 19574.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
