Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoate reductase | SAMEA1710551_01183 | Not Available | Positive | 1262836 - 1264785 | 70814.5 |
| abrb family transcriptional regulator | SAMEA1710551_01184 | Not Available | Positive | 1265223 - 1265648 | 15743.1 |
| udp-glycosyltransferase, mgt subfamily | SAMEA1710551_01185 | Not Available | Positive | 1265680 - 1266867 | 44902.4 |
| protein of uncharacterised function (duf3139) | SAMEA1710551_01186 | Not Available | Positive | 1267059 - 1267463 | 16222.8 |
| lyttr family dna-binding response regulator | SAMEA1710551_01187 | Not Available | Positive | 1267956 - 1268666 | 27713.7 |
| two-component sensor histidine kinase | SAMEA1710551_01188 | Not Available | Positive | 1268660 - 1269997 | 52192.9 |
| abc transporter permease | SAMEA1710551_01189 | Not Available | Positive | 1270174 - 1272741 | 97210.8 |
| abc transporter atp-binding protein | SAMEA1710551_01190 | Not Available | Positive | 1272815 - 1273483 | 24747.2 |
| pts operon transcription antiterminator | SAMEA1710551_01191 | Not Available | Positive | 1273746 - 1274606 | 33491.4 |
| pts system beta-glucoside-specific transporter subunit iiabc | SAMEA1710551_01192 | Not Available | Positive | 1274596 - 1276467 | 66833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
