Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA1710551_01153 | Not Available | Positive | 1223909 - 1224208 | 11966.3 |
| uncharacterised protein | SAMEA1710551_01154 | Not Available | Positive | 1224234 - 1224833 | 24188.9 |
| phage integrase | SAMEA1710551_01155 | Not Available | Negative | 1224985 - 1225260 | 10450.9 |
| phage integrase | SAMEA1710551_01156 | Not Available | Negative | 1225334 - 1226134 | 30955.7 |
| peptidase c60b, sortase b | SAMEA1710551_01157 | Not Available | Negative | 1226454 - 1226867 | 16454.7 |
| serine-aspartate repeat-containing protein sdrf | SAMEA1710551_01158 | Not Available | Positive | 1227137 - 1230577 | 121762.0 |
| deor family transcriptional regulator | SAMEA1710551_01159 | Not Available | Positive | 1232302 - 1233264 | 37156.4 |
| thij/pfpi family protein | SAMEA1710551_01160 | Not Available | Positive | 1233343 - 1233972 | 23789.1 |
| membrane protein | SAMEA1710551_01161 | Not Available | Positive | 1235280 - 1235696 | 15547.4 |
| transcriptional regulator | SAMEA1710551_01162 | Not Available | Positive | 1235697 - 1235909 | 8249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
