Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | SAMEA1710551_01143 | Not Available | Negative | 1211586 - 1212200 | 23811.6 |
| ribonuclease r | SAMEA1710551_01144 | Not Available | Positive | 1212801 - 1214936 | 81504.9 |
| domain of uncharacterised function (duf1877) | SAMEA1710551_01145 | Not Available | Positive | 1216075 - 1216566 | 18862.3 |
| abc transporter permease | SAMEA1710551_01146 | Not Available | Positive | 1216978 - 1217178 | 7441.28 |
| acetyltransferase | SAMEA1710551_01147 | Not Available | Negative | 1217525 - 1217989 | 18116.0 |
| trap family transcriptional regulator | SAMEA1710551_01148 | Not Available | Negative | 1219001 - 1219828 | 30031.1 |
| ssra-binding protein | SAMEA1710551_01149 | Not Available | Positive | 1220447 - 1220902 | 17326.2 |
| Tmrna,resume consensus sequence (at 87): aataaacgcagacgataa | Not Available | Not Available | Positive | 1221060 - 1221409 | Not Available |
| predicted atp-binding protein involved in virulence | SAMEA1710551_01151 | Not Available | Positive | 1221484 - 1223415 | 74144.6 |
| uncharacterised protein | SAMEA1710551_01152 | Not Available | Positive | 1223630 - 1223881 | 10161.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
