Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc-like | SAMEA1710551_01059 | Not Available | Positive | 1116191 - 1116493 | 11857.5 |
| phosphomethylpyrimidine kinase | SAMEA1710551_01061 | Not Available | Positive | 1116787 - 1117581 | 29055.6 |
| hydroxyethylthiazole kinase | SAMEA1710551_01062 | Not Available | Positive | 1117605 - 1118390 | 28180.2 |
| thiamine-phosphate pyrophosphorylase | SAMEA1710551_01063 | Not Available | Positive | 1118413 - 1119045 | 23491.6 |
| pts system lactose/cellobiose-family transporter subunit iib | SAMEA1710551_01064 | Not Available | Positive | 1119184 - 1119486 | 11067.8 |
| abc transporter multidrug-family permease | SAMEA1710551_01065 | Not Available | Negative | 1119552 - 1120301 | 27799.4 |
| abc transporter multidrug-family atp-binding protein | SAMEA1710551_01066 | Not Available | Negative | 1120295 - 1121257 | 36281.8 |
| transcriptional regulator | SAMEA1710551_01067 | Not Available | Negative | 1121261 - 1121713 | 17259.0 |
| gntr family transcriptional regulator | SAMEA1710551_01068 | Not Available | Positive | 1122074 - 1122430 | 13727.9 |
| abc transporter atp-binding protein | SAMEA1710551_01069 | Not Available | Positive | 1122502 - 1123218 | 27397.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
