Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA1710551_01006 | Not Available | Negative | 1061906 - 1062082 | 6937.49 |
| atp phosphoribosyltransferase regulatory subunit | SAMEA1710551_01007 | Not Available | Positive | 1062609 - 1063553 | 37081.1 |
| atp phosphoribosyltransferase | SAMEA1710551_01008 | Not Available | Positive | 1063575 - 1064201 | 23457.4 |
| histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase) | SAMEA1710551_01009 | Not Available | Positive | 1064235 - 1065284 | 39773.0 |
| imidazoleglycerol-phosphate dehydratase | SAMEA1710551_01010 | Not Available | Positive | 1065287 - 1065865 | 21614.0 |
| imidazole glycerol phosphate synthase subunit hish | SAMEA1710551_01011 | Not Available | Positive | 1065867 - 1066472 | 22556.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMEA1710551_01012 | Not Available | Positive | 1066469 - 1067191 | 26611.2 |
| imidazole glycerol phosphate synthase subunit hisf | SAMEA1710551_01013 | Not Available | Positive | 1067173 - 1067931 | 27525.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase /phosphoribosyl-atp pyrophosphatase | SAMEA1710551_01014 | Not Available | Positive | 1067959 - 1068627 | 25689.9 |
| amino acid permease | SAMEA1710551_01015 | Not Available | Positive | 1069434 - 1070762 | 46119.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
