Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SAMEA1710551_00965 | Not Available | Positive | 1015030 - 1015599 | 21516.8 |
| lactate utilization protein b/c | SAMEA1710551_00966 | Not Available | Negative | 1015741 - 1016388 | 24022.3 |
| domain of uncharacterised function (duf2935) | SAMEA1710551_00967 | Not Available | Negative | 1016770 - 1017684 | 34893.7 |
| uncharacterised protein | SAMEA1710551_00968 | Not Available | Negative | 1017989 - 1018171 | 7011.68 |
| pantoate--beta-alanine ligase | SAMEA1710551_00969 | Not Available | Negative | 1018534 - 1019382 | 31611.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMEA1710551_00970 | Not Available | Negative | 1019401 - 1020231 | 30108.7 |
| nadp oxidoreductase, coenzyme f420-dependent | SAMEA1710551_00971 | Not Available | Negative | 1020203 - 1021084 | 33020.0 |
| diguanylate kinase signaling protein | SAMEA1710551_00972 | Not Available | Positive | 1021776 - 1023869 | 81499.3 |
| merr family transcriptional regulator | SAMEA1710551_00973 | Not Available | Positive | 1024323 - 1025141 | 32346.9 |
| ferrous iron transport protein b | SAMEA1710551_00974 | Not Available | Negative | 1025254 - 1027374 | 78277.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
