Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA1710551_00945 | Not Available | Positive | 995092 - 995676 | 22273.7 |
| pyrroline-5-carboxylate reductase | SAMEA1710551_00946 | Not Available | Positive | 995716 - 996519 | 28596.6 |
| extracellular protein | SAMEA1710551_00947 | Not Available | Negative | 996600 - 997775 | 42134.8 |
| uncharacterised protein | SAMEA1710551_00948 | Not Available | Positive | 998041 - 998517 | 18331.4 |
| rna polymerase sigma factor rpod | SAMEA1710551_00949 | Not Available | Positive | 998808 - 999692 | 34351.4 |
| fe2+/zn2+ uptake regulation protein | SAMEA1710551_00950 | Not Available | Negative | 1000167 - 1000583 | 16112.6 |
| periplasmic solute binding protein | SAMEA1710551_00951 | Not Available | Positive | 1000733 - 1001635 | 34097.9 |
| sulfate-transporting atpase | SAMEA1710551_00952 | Not Available | Positive | 1001638 - 1002282 | 24514.2 |
| abc transporter | SAMEA1710551_00953 | Not Available | Positive | 1002275 - 1003063 | 28287.3 |
| putative gtpase, g3e family | SAMEA1710551_00954 | Not Available | Positive | 1003119 - 1004048 | 35428.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
