Burkholderia vietnamiensis RS1

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia vietnamiensis RS1 is a Gram-negative, rod-shaped bacterium characterized as a facultative aerobe, allowing it to thrive in both aerobic and anaerobic environments. This organism is mesophilic, indicating that it grows optimally at moderate temperatures, which is typical for many soil-dwelling bacteria. Burkholderia vietnamiensis RS1 possesses one replicon and features a double membrane structure, characteristic of Gram-negative bacteria. This bacterium is free-living, suggesting it does not rely on a host for survival, yet it has been associated with specific hosts, namely the rice plants Oryza sativa, including both the Indica and Japonica groups. The mobility of Burkholderia vietnamiensis RS1 enhances its ability to colonize diverse habitats, which may include soil and aquatic environments. The ecological role of Burkholderia vietnamiensis RS1 may be significant in rice cultivation, as its presence in association with rice plants could influence soil health and plant growth. The interaction between this bacterium and its plant hosts may have implications for agricultural practices, particularly in enhancing the resilience and productivity of rice crops. Understanding such relationships can provide insights into sustainable agricultural practices and the management of microbial communities in agroecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia vietnamiensis
StrainRS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Oryza sativa, Oryza sativa Indica Group, Oryza sativa Japonica Group
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia vietnamiensis RS1 DNA, sequence77, whole genome

Gene Summary

Adenine Count

1057491 bp

Thymine Count

1061889 bp

Guanine Count

2228070 bp

Cytosine Count

2195277 bp

Genome Length

6542727 bp

Protein-coding Genes

5734 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseBvRS1_07510Not AvailablePositive897992 - 89878027584.1
nadp-dependent oxidoreductaseBvRS1_07520Not AvailablePositive898777 - 89983237517.2
ai-2e family transporterBvRS1_07530Not AvailableNegative900142 - 90119438245.8
lipoproteinBvRS1_07540Not AvailableNegative901424 - 90200819649.5
membrane proteinBvRS1_07550Not AvailableNegative902061 - 90244714284.8
dehydrogenaseBvRS1_07560Not AvailablePositive903182 - 90353513095.7
hypothetical proteinBvRS1_07570Not AvailablePositive903661 - 90408315586.6
rna polymerase sigma factorBvRS1_07580Not AvailablePositive904268 - 90576453818.7
transposaseBvRS1_07590Not AvailablePositive906945 - 90789835184.0
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseBvRS1_07600Not AvailableNegative908028 - 90956055324.8

Displaying genes 851 – 860 of 5862 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.