Burkholderia vietnamiensis RS1

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia vietnamiensis RS1 is a Gram-negative, rod-shaped bacterium characterized as a facultative aerobe, allowing it to thrive in both aerobic and anaerobic environments. This organism is mesophilic, indicating that it grows optimally at moderate temperatures, which is typical for many soil-dwelling bacteria. Burkholderia vietnamiensis RS1 possesses one replicon and features a double membrane structure, characteristic of Gram-negative bacteria. This bacterium is free-living, suggesting it does not rely on a host for survival, yet it has been associated with specific hosts, namely the rice plants Oryza sativa, including both the Indica and Japonica groups. The mobility of Burkholderia vietnamiensis RS1 enhances its ability to colonize diverse habitats, which may include soil and aquatic environments. The ecological role of Burkholderia vietnamiensis RS1 may be significant in rice cultivation, as its presence in association with rice plants could influence soil health and plant growth. The interaction between this bacterium and its plant hosts may have implications for agricultural practices, particularly in enhancing the resilience and productivity of rice crops. Understanding such relationships can provide insights into sustainable agricultural practices and the management of microbial communities in agroecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia vietnamiensis
StrainRS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Oryza sativa, Oryza sativa Indica Group, Oryza sativa Japonica Group
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia vietnamiensis RS1 DNA, sequence77, whole genome

Gene Summary

Adenine Count

1057491 bp

Thymine Count

1061889 bp

Guanine Count

2228070 bp

Cytosine Count

2195277 bp

Genome Length

6542727 bp

Protein-coding Genes

5734 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative major tail subunit proteinBvRS1_16080Not AvailablePositive1873354 - 187383616464.1
Gp35BvRS1_16090Not AvailablePositive1873927 - 187428612382.7
hypothetical proteinBvRS1_16100Not AvailablePositive1874322 - 187465112047.2
Head-tail joining proteinBvRS1_16110Not AvailablePositive1874611 - 187504815775.0
Putative tail length tape measure proteinBvRS1_16120Not AvailablePositive1875038 - 1878361116834.0
Minor tail protein gp14BvRS1_16130Not AvailablePositive1878365 - 187870912438.4
Tail fiber proteinBvRS1_16140Not AvailablePositive1878715 - 1881942109117.0
Tail fiber assembly proteinBvRS1_16150Not AvailablePositive1881994 - 188247017516.3
Gp18, phage minor tail protein lBvRS1_16160Not AvailablePositive1882467 - 188315025018.6
Putative tail component proteinBvRS1_16170Not AvailablePositive1883147 - 188391727731.8

Displaying genes 31 – 40 of 5862 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.