Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity gluconate transporter | PDPJ_1_00914 | Not Available | Positive | 883449 - 884705 | 42062.3 |
| glycerate 2-kinase | PDPJ_1_00915 | Not Available | Positive | 884716 - 885849 | 38952.0 |
| aconitate hydratase 2 | PDPJ_1_00916 | Not Available | Negative | 885991 - 888588 | 93677.2 |
| methyl-accepting chemotaxis protein pctc | PDPJ_1_00917 | Not Available | Positive | 888989 - 890902 | 69727.7 |
| hypothetical protein | PDPJ_1_00918 | Not Available | Positive | 891152 - 892483 | 47841.2 |
| hypothetical protein | PDPJ_1_00919 | Not Available | Positive | 892511 - 892810 | 10922.9 |
| hypothetical protein | PDPJ_1_00920 | Not Available | Positive | 892773 - 893159 | 14097.2 |
| hypothetical protein | PDPJ_1_00921 | Not Available | Positive | 893172 - 893708 | 19099.4 |
| hypothetical protein | PDPJ_1_00922 | Not Available | Negative | 893764 - 894063 | 11975.6 |
| group ii intron-encoded protein ltra | PDPJ_1_00923 | Not Available | Negative | 894172 - 895074 | 33846.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

