Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase 2 | PDPJ_1_00904 | Not Available | Positive | 873733 - 874404 | 24920.8 |
| hypoxanthine phosphoribosyltransferase | PDPJ_1_00905 | Not Available | Negative | 874479 - 875015 | 20450.6 |
| hth-type transcriptional regulator luxr | PDPJ_1_00906 | Not Available | Positive | 875236 - 875823 | 22449.9 |
| fe(3+) ions import atp-binding protein fbpc 2 | PDPJ_1_00907 | Not Available | Negative | 875896 - 876936 | 38222.2 |
| molybdenum transport system permease protein modb | PDPJ_1_00908 | Not Available | Negative | 876936 - 878561 | 60513.4 |
| iron uptake protein a1 precursor | PDPJ_1_00909 | Not Available | Negative | 878718 - 879731 | 37740.1 |
| ammonia channel precursor | PDPJ_1_00910 | Not Available | Negative | 879922 - 881151 | 43037.5 |
| nitrogen regulatory protein p-ii | PDPJ_1_00911 | Not Available | Negative | 881215 - 881553 | 12348.0 |
| hypothetical protein | PDPJ_1_00912 | Not Available | Negative | 881736 - 882104 | 14278.5 |
| carbohydrate diacid regulator | PDPJ_1_00913 | Not Available | Positive | 882160 - 883317 | 43800.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

