Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00894 | Not Available | Negative | 865244 - 865519 | 10458.7 |
| sugar fermentation stimulation protein a | PDPJ_1_00895 | Not Available | Positive | 865674 - 866387 | 26606.7 |
| rna polymerase-binding transcription factor dksa | PDPJ_1_00896 | Not Available | Positive | 866517 - 866966 | 17208.5 |
| glutamyl-q trna(asp) synthetase | PDPJ_1_00897 | Not Available | Positive | 867232 - 868122 | 33195.4 |
| poly(a) polymerase i precursor | PDPJ_1_00898 | Not Available | Positive | 868179 - 869627 | 56192.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | PDPJ_1_00899 | Not Available | Positive | 869624 - 870109 | 17919.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PDPJ_1_00900 | Not Available | Positive | 870135 - 870929 | 28755.8 |
| pantothenate synthetase | PDPJ_1_00901 | Not Available | Positive | 870939 - 871829 | 33323.2 |
| inner membrane transport permease yadh | PDPJ_1_00902 | Not Available | Negative | 872058 - 872714 | 24290.4 |
| daunorubicin/doxorubicin resistance atp-binding protein drra | PDPJ_1_00903 | Not Available | Negative | 872711 - 873634 | 34398.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

