Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthetase | PDPJ_1_00873 | Not Available | Positive | 843244 - 844191 | 35252.7 |
| hypothetical protein | PDPJ_1_00874 | Not Available | Positive | 844345 - 844908 | 20569.3 |
| putative holliday junction resolvase | PDPJ_1_00875 | Not Available | Positive | 844905 - 845330 | 15721.7 |
| twitching mobility protein | PDPJ_1_00876 | Not Available | Negative | 845658 - 846764 | 41371.0 |
| twitching mobility protein | PDPJ_1_00877 | Not Available | Negative | 846776 - 847480 | 25668.1 |
| twitching mobility protein | PDPJ_1_00878 | Not Available | Negative | 847634 - 847810 | 6480.82 |
| alanine racemase | PDPJ_1_00879 | Not Available | Positive | 847833 - 848534 | 25477.3 |
| pyrroline-5-carboxylate reductase | PDPJ_1_00880 | Not Available | Positive | 848550 - 849368 | 28595.4 |
| yggt family protein | PDPJ_1_00881 | Not Available | Positive | 849380 - 849937 | 20902.6 |
| hypothetical protein | PDPJ_1_00882 | Not Available | Positive | 849934 - 850233 | 10924.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

