Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | PDPJ_1_00863 | Not Available | Negative | 834007 - 835170 | 40745.9 |
| d-erythrose-4-phosphate dehydrogenase | PDPJ_1_00864 | Not Available | Negative | 835321 - 836280 | 35319.9 |
| transketolase 1 | PDPJ_1_00865 | Not Available | Negative | 836568 - 838580 | 72626.8 |
| s-adenosylmethionine synthase | PDPJ_1_00866 | Not Available | Positive | 838998 - 840152 | 42072.1 |
| hypothetical protein | PDPJ_1_00867 | Not Available | Positive | 840255 - 840551 | 11331.9 |
| hypothetical protein | PDPJ_1_00868 | Not Available | Negative | 840614 - 840835 | 8291.33 |
| hypothetical protein | PDPJ_1_00869 | Not Available | Negative | 840884 - 841159 | 10458.7 |
| hypothetical protein | PDPJ_1_00870 | Not Available | Positive | 841331 - 841525 | 7605.1 |
| extracellular deoxyribonuclease precursor | PDPJ_1_00871 | Not Available | Positive | 841656 - 842360 | 27213.6 |
| ribosomal rna small subunit methyltransferase e | PDPJ_1_00872 | Not Available | Positive | 842546 - 843223 | 24955.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

