Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapa | PDPJ_1_00853 | Not Available | Positive | 825533 - 825835 | 11303.5 |
| 5-formyltetrahydrofolate cyclo-ligase family protein | PDPJ_1_00854 | Not Available | Positive | 826160 - 826729 | 21910.4 |
| ribose-5-phosphate isomerase a | PDPJ_1_00855 | Not Available | Positive | 826931 - 827590 | 23197.0 |
| d-3-phosphoglycerate dehydrogenase | PDPJ_1_00856 | Not Available | Positive | 827881 - 829110 | 44675.9 |
| 26 kda periplasmic immunogenic protein precursor | PDPJ_1_00857 | Not Available | Negative | 829178 - 829906 | 26426.3 |
| hypothetical protein | PDPJ_1_00858 | Not Available | Negative | 830349 - 830540 | 7128.96 |
| hypothetical protein | PDPJ_1_00859 | Not Available | Negative | 830589 - 830864 | 10458.7 |
| ybak / prolyl-trna synthetase associated domain protein | PDPJ_1_00860 | Not Available | Positive | 831147 - 831470 | 12017.6 |
| small-conductance mechanosensitive channel | PDPJ_1_00861 | Not Available | Negative | 831557 - 832441 | 31756.6 |
| fructose-bisphosphate aldolase class 2 | PDPJ_1_00862 | Not Available | Negative | 832790 - 833866 | 38831.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

