Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | PDPJ_1_00823 | Not Available | Negative | 797526 - 798323 | 30631.4 |
| gtp pyrophosphokinase | PDPJ_1_00824 | Not Available | Negative | 798389 - 800608 | 83980.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | PDPJ_1_00825 | Not Available | Negative | 800671 - 801738 | 39099.9 |
| signal transduction histidine-protein kinase bara | PDPJ_1_00826 | Not Available | Positive | 801860 - 804625 | 102849.0 |
| holo-[acyl-carrier-protein] synthase | PDPJ_1_00827 | Not Available | Negative | 804738 - 805118 | 13885.8 |
| pyridoxine 5'-phosphate synthase | PDPJ_1_00828 | Not Available | Negative | 805118 - 805849 | 26501.9 |
| dna repair protein reco | PDPJ_1_00829 | Not Available | Negative | 805846 - 806556 | 26845.8 |
| gtpase era | PDPJ_1_00830 | Not Available | Negative | 806566 - 807471 | 34608.8 |
| ribonuclease 3 | PDPJ_1_00831 | Not Available | Negative | 807468 - 808142 | 25018.9 |
| signal peptidase i | PDPJ_1_00832 | Not Available | Negative | 808153 - 809043 | 33189.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

