Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | PDPJ_1_00813 | Not Available | Positive | 785920 - 788616 | 99764.4 |
| rna polymerase sigma factor rpos | PDPJ_1_00814 | Not Available | Negative | 788766 - 789767 | 37633.4 |
| murein hydrolase activator nlpd precursor | PDPJ_1_00815 | Not Available | Negative | 789821 - 790645 | 29785.4 |
| protein-l-isoaspartate o-methyltransferase | PDPJ_1_00816 | Not Available | Negative | 790649 - 791278 | 23152.9 |
| trna pseudouridine synthase d | PDPJ_1_00817 | Not Available | Negative | 791395 - 792450 | 39594.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PDPJ_1_00818 | Not Available | Negative | 792454 - 792927 | 16623.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | PDPJ_1_00819 | Not Available | Negative | 792927 - 793634 | 25058.0 |
| cell division protein ftsb | PDPJ_1_00820 | Not Available | Negative | 793677 - 793964 | 11018.0 |
| enolase | PDPJ_1_00821 | Not Available | Negative | 794269 - 795570 | 45829.6 |
| ctp synthase | PDPJ_1_00822 | Not Available | Negative | 795654 - 797294 | 60013.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

