Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t-protein | PDPJ_1_00785 | Not Available | Negative | 754257 - 755387 | 42147.6 |
| phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive | PDPJ_1_00786 | Not Available | Negative | 755408 - 756475 | 39014.7 |
| sensor histidine kinase yehu | PDPJ_1_00787 | Not Available | Positive | 756623 - 757795 | 42517.2 |
| transcriptional regulatory protein yeht | PDPJ_1_00788 | Not Available | Positive | 758352 - 759065 | 27246.5 |
| hypothetical protein | PDPJ_1_00789 | Not Available | Negative | 759069 - 759452 | 14329.8 |
| transposase dde domain protein | PDPJ_1_00790 | Not Available | Negative | 759668 - 760600 | 35075.9 |
| inner membrane protein yjiy | PDPJ_1_00791 | Not Available | Positive | 760839 - 762317 | 53466.2 |
| outer membrane lipoprotein slyb precursor | PDPJ_1_00792 | Not Available | Negative | 762434 - 762910 | 15709.9 |
| 50s ribosomal protein l19 | PDPJ_1_00793 | Not Available | Negative | 763086 - 763436 | 13072.9 |
| trna (guanine-n(1)-)-methyltransferase | PDPJ_1_00794 | Not Available | Negative | 763473 - 764219 | 27794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

