Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 741348 - 744237 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 744560 - 744635 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 744680 - 744756 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 744833 - 746372 | Not Available |
| chaperone protein clpb | PDPJ_1_00779 | Not Available | Negative | 746849 - 749422 | 95595.9 |
| laccase domain protein yfih | PDPJ_1_00780 | Not Available | Negative | 749590 - 750321 | 26571.5 |
| ribosomal large subunit pseudouridine synthase d | PDPJ_1_00781 | Not Available | Negative | 750324 - 751298 | 36728.4 |
| outer membrane protein assembly factor bamd precursor | PDPJ_1_00782 | Not Available | Positive | 751467 - 752195 | 27965.3 |
| ribosome-associated inhibitor a | PDPJ_1_00783 | Not Available | Positive | 752600 - 752956 | 13519.2 |
| p-protein | PDPJ_1_00784 | Not Available | Positive | 753034 - 754206 | 43826.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

