Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysl | PDPJ_1_00771 | Not Available | Positive | 731640 - 732533 | 34283.2 |
| 3-methyl-adenine dna glycosylase i | PDPJ_1_00772 | Not Available | Negative | 732530 - 733186 | 24751.0 |
| dna damage-inducible protein yebg | PDPJ_1_00773 | Not Available | Positive | 733302 - 733604 | 11162.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | PDPJ_1_00774 | Not Available | Positive | 733940 - 734971 | 36084.5 |
| glutamate/gamma-aminobutyrate antiporter | PDPJ_1_00775 | Not Available | Positive | 735519 - 737045 | 55234.2 |
| glutaminase 1 | PDPJ_1_00776 | Not Available | Positive | 737056 - 738015 | 34444.0 |
| glutamate decarboxylase alpha | PDPJ_1_00777 | Not Available | Positive | 738027 - 739427 | 52773.6 |
| hypothetical protein | PDPJ_1_00778 | Not Available | Positive | 739629 - 740243 | 22552.5 |
| Trna-asp | Not Available | Not Available | Positive | 740885 - 740961 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 741039 - 741153 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

