Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine dehydratase | PDPJ_1_00761 | Not Available | Negative | 715276 - 716079 | 29253.2 |
| membrane-bound lytic murein transglycosylase a precursor | PDPJ_1_00762 | Not Available | Negative | 716224 - 717354 | 41975.1 |
| amino-acid acetyltransferase | PDPJ_1_00763 | Not Available | Positive | 717769 - 719094 | 48953.5 |
| disulfide bond formation protein b | PDPJ_1_00764 | Not Available | Positive | 719366 - 719917 | 20256.4 |
| recbcd enzyme subunit recd | PDPJ_1_00765 | Not Available | Negative | 719986 - 722109 | 77922.1 |
| recbcd enzyme subunit recb | PDPJ_1_00766 | Not Available | Negative | 722102 - 725767 | 137634.0 |
| recbcd enzyme subunit recc | PDPJ_1_00767 | Not Available | Negative | 726061 - 729516 | 131404.0 |
| hypothetical protein | PDPJ_1_00768 | Not Available | Positive | 729682 - 729957 | 10458.7 |
| hypothetical protein | PDPJ_1_00769 | Not Available | Positive | 730006 - 730227 | 8291.33 |
| tellurite resistance protein teha | PDPJ_1_00770 | Not Available | Negative | 730506 - 731492 | 35672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

