Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flap endonuclease xni | PDPJ_1_00751 | Not Available | Positive | 708127 - 708903 | 28600.2 |
| ribosomal rna large subunit methyltransferase m | PDPJ_1_00752 | Not Available | Negative | 708960 - 710048 | 41538.2 |
| hypothetical protein | PDPJ_1_00753 | Not Available | Negative | 710058 - 710462 | 14271.7 |
| alpha/beta hydrolase family protein | PDPJ_1_00754 | Not Available | Negative | 710467 - 711165 | 25657.6 |
| glycine cleavage system transcriptional activator | PDPJ_1_00755 | Not Available | Negative | 711155 - 712066 | 34204.0 |
| cysteine desulfurase csda | PDPJ_1_00756 | Not Available | Positive | 712438 - 713658 | 44163.8 |
| sulfur acceptor protein csde | PDPJ_1_00757 | Not Available | Positive | 713676 - 714101 | 15844.0 |
| hypothetical protein | PDPJ_1_00758 | Not Available | Negative | 714282 - 714503 | 8272.28 |
| hypothetical protein | PDPJ_1_00759 | Not Available | Negative | 714552 - 714827 | 10458.7 |
| hypothetical protein | PDPJ_1_00760 | Not Available | Positive | 715011 - 715187 | 6518.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

