Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00741 | Not Available | Positive | 697011 - 697286 | 10458.7 |
| hypothetical protein | PDPJ_1_00742 | Not Available | Positive | 697335 - 697556 | 8291.33 |
| hypothetical protein | PDPJ_1_00743 | Not Available | Positive | 699536 - 699766 | 8829.31 |
| hypothetical protein | PDPJ_1_00744 | Not Available | Positive | 699783 - 700052 | 10073.4 |
| hypothetical protein | PDPJ_1_00745 | Not Available | Negative | 700078 - 700851 | 29098.6 |
| secy interacting protein syd | PDPJ_1_00746 | Not Available | Negative | 700854 - 701408 | 20666.7 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | PDPJ_1_00747 | Not Available | Positive | 701541 - 702389 | 32494.1 |
| hypothetical protein | PDPJ_1_00748 | Not Available | Positive | 702508 - 704787 | 87657.9 |
| phytochrome-like protein cph2 | PDPJ_1_00749 | Not Available | Positive | 704937 - 706481 | 59440.2 |
| log family protein ygdh | PDPJ_1_00750 | Not Available | Positive | 706679 - 708055 | 51260.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

