Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | PDPJ_1_00731 | Not Available | Negative | 687419 - 688264 | 29826.9 |
| 30s ribosomal protein s2 | PDPJ_1_00732 | Not Available | Negative | 688378 - 689103 | 26647.1 |
| methionine aminopeptidase | PDPJ_1_00733 | Not Available | Positive | 689427 - 690251 | 30444.6 |
| bifunctional uridylyltransferase/uridylyl-removing enzyme | PDPJ_1_00734 | Not Available | Positive | 690331 - 692952 | 100951.0 |
| sulfite reductase | PDPJ_1_00735 | Not Available | Negative | 693081 - 693542 | 16909.2 |
| trna pseudouridine synthase c | PDPJ_1_00736 | Not Available | Negative | 693640 - 694419 | 29860.1 |
| hypothetical protein | PDPJ_1_00737 | Not Available | Negative | 694421 - 694738 | 12048.3 |
| hypothetical protein | PDPJ_1_00738 | Not Available | Positive | 694887 - 695927 | 39251.3 |
| hypothetical protein | PDPJ_1_00739 | Not Available | Positive | 695931 - 696254 | 12893.4 |
| anaerobic nitric oxide reductase transcription regulator norr | PDPJ_1_00740 | Not Available | Negative | 696240 - 696872 | 24225.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

