Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | PDPJ_1_00721 | Not Available | Negative | 676895 - 677350 | 17018.7 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | PDPJ_1_00722 | Not Available | Negative | 677450 - 678478 | 36194.6 |
| chaperone protein skp precursor | PDPJ_1_00723 | Not Available | Negative | 678583 - 679092 | 18896.9 |
| outer membrane protein assembly factor bama precursor | PDPJ_1_00724 | Not Available | Negative | 679113 - 681536 | 90157.7 |
| regulator of sigma-e protease rsep | PDPJ_1_00725 | Not Available | Negative | 681573 - 682925 | 49161.1 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | PDPJ_1_00726 | Not Available | Negative | 682925 - 684121 | 42920.0 |
| phosphatidate cytidylyltransferase | PDPJ_1_00727 | Not Available | Negative | 684183 - 685031 | 30497.3 |
| ditrans,polycis-undecaprenyl-diphosphate synthase | PDPJ_1_00728 | Not Available | Negative | 685137 - 685901 | 28517.3 |
| ribosome-recycling factor | PDPJ_1_00729 | Not Available | Negative | 685981 - 686538 | 20767.1 |
| uridylate kinase | PDPJ_1_00730 | Not Available | Negative | 686598 - 687326 | 26086.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

