Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00711 | Not Available | Positive | 663635 - 663823 | 7291.86 |
| group ii intron-encoded protein ltra | PDPJ_1_00712 | Not Available | Negative | 663881 - 665125 | 47932.2 |
| tryptophan-specific transport protein | PDPJ_1_00713 | Not Available | Negative | 665796 - 667007 | 42853.2 |
| d-alanine--d-alanine ligase b | PDPJ_1_00714 | Not Available | Negative | 667211 - 668122 | 33487.4 |
| trna(ile)-lysidine synthase | PDPJ_1_00715 | Not Available | Negative | 668267 - 669574 | 49459.1 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | PDPJ_1_00716 | Not Available | Negative | 669735 - 670694 | 35220.5 |
| dna polymerase iii subunit alpha | PDPJ_1_00717 | Not Available | Negative | 670760 - 674239 | 130035.0 |
| ribonuclease hii | PDPJ_1_00718 | Not Available | Negative | 674357 - 674962 | 22031.7 |
| lipid-a-disaccharide synthase | PDPJ_1_00719 | Not Available | Negative | 674968 - 676110 | 42645.2 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | PDPJ_1_00720 | Not Available | Negative | 676110 - 676898 | 28428.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

