Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine import atp-binding protein metn | PDPJ_1_00701 | Not Available | Positive | 656470 - 657507 | 37695.8 |
| d-methionine transport system permease protein meti | PDPJ_1_00702 | Not Available | Positive | 657497 - 658183 | 23891.3 |
| d-methionine-binding lipoprotein metq precursor | PDPJ_1_00703 | Not Available | Positive | 658252 - 659076 | 29700.1 |
| 50s ribosomal protein l36 2 | PDPJ_1_00704 | Not Available | Negative | 659158 - 659301 | 5484.96 |
| 50s ribosomal protein l31 type b | PDPJ_1_00705 | Not Available | Negative | 659301 - 659561 | 10028.8 |
| putative trna (adenine(37)-n6)-methyltransferase | PDPJ_1_00706 | Not Available | Positive | 659684 - 660382 | 25701.5 |
| proline--trna ligase | PDPJ_1_00707 | Not Available | Positive | 660514 - 662232 | 63412.6 |
| hypothetical protein | PDPJ_1_00708 | Not Available | Positive | 662427 - 662741 | 12315.6 |
| diguanylate cyclase dosc | PDPJ_1_00709 | Not Available | Positive | 662829 - 663287 | 17294.4 |
| hypothetical protein | PDPJ_1_00710 | Not Available | Positive | 663428 - 663631 | 7392.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

