Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 646266 - 646341 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 646445 - 647984 | Not Available |
| putative abc transporter-binding protein precursor | PDPJ_1_00693 | Not Available | Negative | 648477 - 650303 | 70247.4 |
| oligopeptide transport atp-binding protein oppf | PDPJ_1_00694 | Not Available | Negative | 650331 - 651161 | 31074.3 |
| oligopeptide transport atp-binding protein oppd | PDPJ_1_00695 | Not Available | Negative | 651175 - 651540 | 13633.8 |
| oligopeptide transport atp-binding protein oppd | PDPJ_1_00696 | Not Available | Negative | 651540 - 652061 | 19452.5 |
| inner membrane abc transporter permease protein yeje | PDPJ_1_00697 | Not Available | Negative | 652072 - 653115 | 38959.5 |
| inner membrane abc transporter permease protein yejb | PDPJ_1_00698 | Not Available | Negative | 653112 - 654143 | 38242.2 |
| hypothetical protein | PDPJ_1_00699 | Not Available | Positive | 654487 - 655494 | 36874.7 |
| d-glycero-beta-d-manno-heptose-1,7-bisphosphate 7-phosphatase | PDPJ_1_00700 | Not Available | Negative | 655568 - 656122 | 20479.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

