Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00669 | Not Available | Negative | 616765 - 617931 | 42637.6 |
| uracil permease | PDPJ_1_00670 | Not Available | Positive | 618179 - 619444 | 43956.5 |
| multidrug efflux pump subunit acrb | PDPJ_1_00671 | Not Available | Negative | 619547 - 622663 | 112582.0 |
| multidrug resistance protein mexa precursor | PDPJ_1_00672 | Not Available | Negative | 622680 - 623891 | 43385.0 |
| multidrug resistance operon repressor | PDPJ_1_00673 | Not Available | Positive | 624044 - 624478 | 16756.5 |
| uracil phosphoribosyltransferase | PDPJ_1_00674 | Not Available | Negative | 624541 - 625167 | 22742.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | PDPJ_1_00675 | Not Available | Positive | 625364 - 626404 | 37085.3 |
| phosphoribosylglycinamide formyltransferase | PDPJ_1_00676 | Not Available | Positive | 626408 - 627055 | 23524.0 |
| glutamine amidotransferases class-ii | PDPJ_1_00677 | Not Available | Negative | 627183 - 627962 | 29310.5 |
| phosphoheptose isomerase | PDPJ_1_00678 | Not Available | Negative | 628019 - 628597 | 20927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

