Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | PDPJ_1_00659 | Not Available | Positive | 609237 - 609737 | 18795.3 |
| hypothetical protein | PDPJ_1_00660 | Not Available | Positive | 609813 - 610181 | 14111.8 |
| putative transposase | PDPJ_1_00661 | Not Available | Positive | 610304 - 611386 | 42410.9 |
| putative peroxiredoxin bcp | PDPJ_1_00662 | Not Available | Positive | 611647 - 612117 | 17601.1 |
| pheromone autoinducer 2 transporter | PDPJ_1_00663 | Not Available | Negative | 612226 - 613305 | 39610.1 |
| sira-like protein | PDPJ_1_00664 | Not Available | Negative | 613308 - 613538 | 8521.47 |
| tpr repeat-containing protein yfgc precursor | PDPJ_1_00665 | Not Available | Positive | 613741 - 615204 | 54731.9 |
| arsenate reductase | PDPJ_1_00666 | Not Available | Positive | 615213 - 615563 | 13037.7 |
| nad(p)h dehydrogenase (quinone) | PDPJ_1_00667 | Not Available | Positive | 615564 - 616139 | 20753.1 |
| hypothetical protein | PDPJ_1_00668 | Not Available | Positive | 616179 - 616610 | 16696.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

