Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron-encoded protein ltra | PDPJ_1_00061 | Not Available | Negative | 52056 - 53366 | 50335.0 |
| 50s ribosomal protein l20 | PDPJ_1_00062 | Not Available | Negative | 53962 - 54315 | 13476.6 |
| 50s ribosomal protein l35 | PDPJ_1_00063 | Not Available | Negative | 54358 - 54552 | 7296.28 |
| translation initiation factor if-3 | PDPJ_1_00064 | Not Available | Negative | 54653 - 55066 | 15681.1 |
| threonine--trna ligase | PDPJ_1_00065 | Not Available | Negative | 55208 - 57139 | 73652.0 |
| hypothetical protein | PDPJ_1_00066 | Not Available | Positive | 57568 - 57843 | 10458.7 |
| hypothetical protein | PDPJ_1_00067 | Not Available | Positive | 57892 - 58113 | 8291.33 |
| fructosamine kinase | PDPJ_1_00068 | Not Available | Positive | 58448 - 59314 | 33487.7 |
| 2-deoxyglucose-6-phosphate phosphatase | PDPJ_1_00069 | Not Available | Positive | 59450 - 59665 | 8059.45 |
| hypothetical protein | PDPJ_1_00070 | Not Available | Negative | 59822 - 60043 | 8291.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

