Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt efflux protein corc | PDPJ_1_00639 | Not Available | Positive | 589072 - 589944 | 33131.8 |
| apolipoprotein n-acyltransferase | PDPJ_1_00640 | Not Available | Positive | 589951 - 591504 | 57866.1 |
| hypothetical protein | PDPJ_1_00641 | Not Available | Positive | 591621 - 592316 | 24476.9 |
| hypothetical protein | PDPJ_1_00642 | Not Available | Negative | 592421 - 592903 | 18038.6 |
| leucine--trna ligase | PDPJ_1_00643 | Not Available | Positive | 593263 - 595839 | 97074.1 |
| lps-assembly lipoprotein lpte precursor | PDPJ_1_00644 | Not Available | Positive | 595982 - 596668 | 25460.2 |
| dna polymerase iii subunit delta | PDPJ_1_00645 | Not Available | Positive | 596665 - 597693 | 39143.7 |
| ribosomal silencing factor rsfs | PDPJ_1_00646 | Not Available | Positive | 597877 - 598194 | 11889.3 |
| ribosomal rna large subunit methyltransferase h | PDPJ_1_00647 | Not Available | Positive | 598201 - 598671 | 17488.2 |
| stage v sporulation protein d | PDPJ_1_00648 | Not Available | Positive | 598678 - 600639 | 74026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

