Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 582804 - 582878 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 582914 - 582998 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 583046 - 583130 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 583176 - 583250 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 583285 - 583369 | Not Available |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | PDPJ_1_00634 | Not Available | Negative | 583689 - 584849 | 43264.2 |
| penicillin-binding protein 1f | PDPJ_1_00635 | Not Available | Positive | 585008 - 585700 | 26480.6 |
| (dimethylallyl)adenosine trna methylthiotransferase miab | PDPJ_1_00636 | Not Available | Positive | 585865 - 587289 | 53519.0 |
| phoh-like protein | PDPJ_1_00637 | Not Available | Positive | 587412 - 588443 | 38725.5 |
| endoribonuclease ybey | PDPJ_1_00638 | Not Available | Positive | 588530 - 588994 | 17464.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

