Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00624 | Not Available | Negative | 571916 - 572725 | 31248.2 |
| hypothetical protein | PDPJ_1_00625 | Not Available | Negative | 572767 - 573147 | 13850.7 |
| release factor glutamine methyltransferase | PDPJ_1_00626 | Not Available | Negative | 573160 - 574008 | 30909.8 |
| peptide chain release factor 1 | PDPJ_1_00627 | Not Available | Negative | 574010 - 575098 | 40644.8 |
| glutamyl-trna reductase | PDPJ_1_00628 | Not Available | Negative | 575268 - 576521 | 45739.8 |
| outer-membrane lipoprotein lolb precursor | PDPJ_1_00629 | Not Available | Positive | 576782 - 577435 | 24620.5 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | PDPJ_1_00630 | Not Available | Positive | 577450 - 578319 | 31688.9 |
| ribose-phosphate pyrophosphokinase | PDPJ_1_00631 | Not Available | Positive | 578352 - 579299 | 34340.4 |
| peptidyl-trna hydrolase | PDPJ_1_00632 | Not Available | Positive | 579616 - 580206 | 21407.9 |
| ribosome-binding atpase ychf | PDPJ_1_00633 | Not Available | Positive | 580268 - 581359 | 39718.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

