Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna endonuclease smra | PDPJ_1_00615 | Not Available | Negative | 563367 - 563948 | 22233.9 |
| Trna-pro | Not Available | Not Available | Positive | 564376 - 564452 | Not Available |
| leucine efflux protein | PDPJ_1_00616 | Not Available | Negative | 564710 - 565141 | 14958.7 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | PDPJ_1_00617 | Not Available | Negative | 565205 - 565684 | 16842.4 |
| trifunctional nucleotide phosphoesterase protein yfkn precursor | PDPJ_1_00618 | Not Available | Negative | 565827 - 566555 | 26601.8 |
| trifunctional nucleotide phosphoesterase protein yfkn precursor | PDPJ_1_00619 | Not Available | Negative | 566594 - 567511 | 33617.2 |
| na(+)/h(+) antiporter nhac | PDPJ_1_00620 | Not Available | Negative | 567781 - 569139 | 47165.5 |
| methyl-accepting chemotaxis protein pctb | PDPJ_1_00621 | Not Available | Positive | 569442 - 570359 | 33658.2 |
| serine transporter | PDPJ_1_00622 | Not Available | Negative | 570248 - 570754 | 18230.6 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | PDPJ_1_00623 | Not Available | Negative | 571047 - 571901 | 31265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

