Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible protein | PDPJ_1_00605 | Not Available | Negative | 554646 - 554885 | 8709.56 |
| hypothetical protein | PDPJ_1_00606 | Not Available | Positive | 554957 - 555232 | 10458.7 |
| hypothetical protein | PDPJ_1_00607 | Not Available | Positive | 555281 - 555502 | 8364.37 |
| hypothetical protein | PDPJ_1_00608 | Not Available | Negative | 555565 - 555759 | 7373.21 |
| outer membrane protein a precursor | PDPJ_1_00609 | Not Available | Negative | 555947 - 556990 | 36468.5 |
| invasion protein regulator | PDPJ_1_00610 | Not Available | Positive | 557663 - 558328 | 24774.8 |
| hypothetical protein | PDPJ_1_00611 | Not Available | Positive | 558315 - 558752 | 16595.0 |
| hth-type transcriptional regulator cuer | PDPJ_1_00612 | Not Available | Negative | 558749 - 559057 | 11693.2 |
| copper-exporting p-type atpase a | PDPJ_1_00613 | Not Available | Positive | 559324 - 562233 | 103295.0 |
| trab family protein | PDPJ_1_00614 | Not Available | Positive | 562442 - 563275 | 31161.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

