Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate transport regulatory protein pgtc precursor | PDPJ_1_00585 | Not Available | Positive | 536567 - 537196 | 24085.9 |
| phosphoglycerate transport system sensor protein pgtb | PDPJ_1_00586 | Not Available | Positive | 537199 - 538473 | 48479.9 |
| hypothetical protein | PDPJ_1_00587 | Not Available | Positive | 538529 - 538804 | 10458.7 |
| hypothetical protein | PDPJ_1_00588 | Not Available | Negative | 538987 - 539208 | 8291.33 |
| hypothetical protein | PDPJ_1_00589 | Not Available | Negative | 539257 - 539532 | 10458.7 |
| hypothetical protein | PDPJ_1_00590 | Not Available | Positive | 539641 - 539862 | 8291.33 |
| phosphoglycerate transport system sensor protein pgtb | PDPJ_1_00591 | Not Available | Positive | 540051 - 540515 | 17326.0 |
| c4-dicarboxylate transport transcriptional regulatory protein dctd | PDPJ_1_00592 | Not Available | Positive | 540811 - 542088 | 47897.2 |
| hypothetical protein | PDPJ_1_00593 | Not Available | Negative | 542138 - 542557 | 15213.4 |
| hypothetical protein | PDPJ_1_00594 | Not Available | Negative | 542576 - 542842 | 9719.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

