Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protease yhbu precursor | PDPJ_1_00575 | Not Available | Negative | 528633 - 528980 | 12265.5 |
| pyruvate formate-lyase 1-activating enzyme | PDPJ_1_00576 | Not Available | Positive | 529290 - 530036 | 28581.2 |
| group ii intron-encoded protein ltra | PDPJ_1_00577 | Not Available | Negative | 530105 - 531415 | 50341.0 |
| hypothetical protein | PDPJ_1_00578 | Not Available | Negative | 532046 - 532165 | 4298.41 |
| formate--tetrahydrofolate ligase | PDPJ_1_00579 | Not Available | Positive | 532543 - 534195 | 58382.8 |
| hypothetical protein | PDPJ_1_00580 | Not Available | Negative | 534401 - 534622 | 8364.37 |
| hypothetical protein | PDPJ_1_00581 | Not Available | Negative | 534671 - 534946 | 10458.7 |
| hypothetical protein | PDPJ_1_00582 | Not Available | Positive | 535136 - 535342 | 8251.35 |
| hypothetical protein | PDPJ_1_00583 | Not Available | Positive | 535373 - 535744 | 14892.6 |
| phosphoglycerate transport regulatory protein pgtc precursor | PDPJ_1_00584 | Not Available | Positive | 535955 - 536500 | 20787.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

