Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00051 | Not Available | Negative | 43283 - 44062 | 27259.2 |
| group 2 truncated hemoglobin yjbi | PDPJ_1_00052 | Not Available | Negative | 44230 - 44682 | 17183.5 |
| trimethylamine-n-oxide reductase precursor | PDPJ_1_00053 | Not Available | Negative | 44772 - 47228 | 92570.0 |
| hypothetical protein | PDPJ_1_00054 | Not Available | Positive | 47324 - 47692 | 14123.8 |
| hypothetical protein | PDPJ_1_00055 | Not Available | Negative | 48068 - 48289 | 8291.33 |
| hypothetical protein | PDPJ_1_00056 | Not Available | Negative | 48338 - 48613 | 10458.7 |
| putative transposase | PDPJ_1_00057 | Not Available | Positive | 48727 - 49698 | 38421.1 |
| cytochrome c-type protein torc | PDPJ_1_00058 | Not Available | Negative | 49885 - 50343 | 17111.1 |
| cytochrome c-type protein napc | PDPJ_1_00059 | Not Available | Negative | 50385 - 51065 | 25910.4 |
| periplasmic nitrate reductase protein nape | PDPJ_1_00060 | Not Available | Negative | 51118 - 51288 | 6322.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

