Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00549 | Not Available | Positive | 500799 - 501452 | 23654.0 |
| chorismate synthase | PDPJ_1_00550 | Not Available | Negative | 501823 - 502911 | 39441.9 |
| pts system mannose-specific eiibca component | PDPJ_1_00551 | Not Available | Negative | 503046 - 504950 | 65753.8 |
| putative phospholipase a1 precursor | PDPJ_1_00552 | Not Available | Negative | 505381 - 506235 | 32603.8 |
| mannose-6-phosphate isomerase | PDPJ_1_00553 | Not Available | Negative | 506417 - 507616 | 43743.8 |
| hth-type transcriptional activator rhar | PDPJ_1_00554 | Not Available | Negative | 507793 - 508635 | 32702.3 |
| pts system mannose-specific eiibca component | PDPJ_1_00555 | Not Available | Negative | 508632 - 509438 | 30358.7 |
| pts system mannose-specific eiibca component | PDPJ_1_00556 | Not Available | Negative | 509459 - 509767 | 10946.4 |
| hypothetical protein | PDPJ_1_00557 | Not Available | Positive | 509819 - 510067 | 8961.99 |
| efflux pump membrane transporter bepe | PDPJ_1_00558 | Not Available | Negative | 509952 - 513074 | 113541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

