Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase a | PDPJ_1_00519 | Not Available | Negative | 470088 - 470873 | 29673.3 |
| sialyltransferase pmo188 | PDPJ_1_00520 | Not Available | Negative | 471045 - 471497 | 16572.9 |
| hypothetical protein | PDPJ_1_00521 | Not Available | Positive | 471676 - 471852 | 6814.18 |
| hypothetical protein | PDPJ_1_00522 | Not Available | Negative | 472078 - 475920 | 141401.0 |
| aspartate-semialdehyde dehydrogenase 2 | PDPJ_1_00523 | Not Available | Negative | 476204 - 477217 | 37241.3 |
| erythronate-4-phosphate dehydrogenase | PDPJ_1_00524 | Not Available | Negative | 477201 - 478385 | 42956.5 |
| udp-glucose 6-dehydrogenase | PDPJ_1_00525 | Not Available | Negative | 478388 - 479554 | 43021.5 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 1 | PDPJ_1_00526 | Not Available | Negative | 480228 - 481442 | 42855.1 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | PDPJ_1_00527 | Not Available | Positive | 481632 - 483767 | 79258.7 |
| hypothetical protein | PDPJ_1_00528 | Not Available | Negative | 483889 - 484839 | 35384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

