Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination protein rfah | PDPJ_1_00509 | Not Available | Negative | 459998 - 460255 | 10178.2 |
| di-/tripeptide transporter | PDPJ_1_00510 | Not Available | Positive | 460691 - 461125 | 15919.5 |
| dipeptide and tripeptide permease a | PDPJ_1_00511 | Not Available | Positive | 461070 - 462080 | 36127.9 |
| regulator of rpos | PDPJ_1_00512 | Not Available | Negative | 462133 - 463185 | 38953.0 |
| hth-type transcriptional regulator dmlr | PDPJ_1_00513 | Not Available | Positive | 463508 - 464383 | 33388.2 |
| amidophosphoribosyltransferase | PDPJ_1_00514 | Not Available | Negative | 464580 - 466097 | 56001.9 |
| colicin v production protein | PDPJ_1_00515 | Not Available | Negative | 466167 - 466658 | 18024.3 |
| cell division protein dedd | PDPJ_1_00516 | Not Available | Negative | 466723 - 467403 | 24548.5 |
| bifunctional protein folc | PDPJ_1_00517 | Not Available | Negative | 467457 - 468725 | 45899.8 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | PDPJ_1_00518 | Not Available | Negative | 468868 - 469794 | 34040.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

