Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase d | PDPJ_1_00500 | Not Available | Negative | 447910 - 449814 | 70451.8 |
| dna-binding protein hu-beta | PDPJ_1_00501 | Not Available | Negative | 450168 - 450440 | 9362.11 |
| lon protease | PDPJ_1_00502 | Not Available | Negative | 450641 - 453004 | 87803.5 |
| atp-dependent clp protease atp-binding subunit clpx | PDPJ_1_00503 | Not Available | Negative | 453221 - 454510 | 47030.3 |
| atp-dependent clp protease proteolytic subunit precursor | PDPJ_1_00504 | Not Available | Negative | 454623 - 455246 | 22932.6 |
| trigger factor | PDPJ_1_00505 | Not Available | Negative | 455352 - 456650 | 47520.9 |
| Trna-arg | Not Available | Not Available | Positive | 457164 - 457240 | Not Available |
| bifunctional protein fold protein | PDPJ_1_00506 | Not Available | Positive | 457498 - 458358 | 30812.4 |
| utp--glucose-1-phosphate uridylyltransferase | PDPJ_1_00507 | Not Available | Negative | 458759 - 459661 | 32566.6 |
| transcription antitermination protein rfah | PDPJ_1_00508 | Not Available | Negative | 459742 - 459951 | 7817.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

