Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate-starvation-inducible e | PDPJ_1_00480 | Not Available | Negative | 428922 - 429167 | 8869.73 |
| tim44-like domain protein | PDPJ_1_00481 | Not Available | Negative | 429420 - 430277 | 31457.7 |
| hypothetical protein | PDPJ_1_00482 | Not Available | Positive | 430872 - 431468 | 22736.1 |
| lysophospholipid transporter lplt | PDPJ_1_00483 | Not Available | Positive | 431483 - 433360 | 69475.5 |
| 2-succinylbenzoate--coa ligase | PDPJ_1_00484 | Not Available | Negative | 433445 - 434875 | 52955.4 |
| o-succinylbenzoate synthase | PDPJ_1_00485 | Not Available | Negative | 434863 - 435837 | 35778.9 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | PDPJ_1_00486 | Not Available | Negative | 435890 - 436708 | 30226.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | PDPJ_1_00487 | Not Available | Negative | 436692 - 438467 | 63934.3 |
| menaquinone-specific isochorismate synthase | PDPJ_1_00488 | Not Available | Negative | 438449 - 439816 | 51544.3 |
| glutamate-pyruvate aminotransferase alaa | PDPJ_1_00489 | Not Available | Positive | 440285 - 441499 | 45464.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

