Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen sensor histidine kinase nreb | PDPJ_1_00041 | Not Available | Negative | 34174 - 35706 | 57498.8 |
| transcriptional regulatory protein uhpa | PDPJ_1_00042 | Not Available | Negative | 35706 - 36314 | 21792.3 |
| putative metallo-hydrolase | PDPJ_1_00043 | Not Available | Negative | 36455 - 37108 | 23872.4 |
| hypothetical protein | PDPJ_1_00044 | Not Available | Negative | 37449 - 37685 | 8883.06 |
| peptidase m15 | PDPJ_1_00045 | Not Available | Negative | 37990 - 38547 | 20524.8 |
| murein l,d-transpeptidase | PDPJ_1_00046 | Not Available | Negative | 38707 - 40455 | 66853.2 |
| hypothetical protein | PDPJ_1_00047 | Not Available | Negative | 40821 - 40955 | 5155.46 |
| hypothetical protein | PDPJ_1_00048 | Not Available | Negative | 41090 - 41365 | 10458.7 |
| hth-type transcriptional regulator mgra | PDPJ_1_00049 | Not Available | Positive | 41917 - 42408 | 18448.2 |
| hth-type transcriptional regulator cynr | PDPJ_1_00050 | Not Available | Positive | 42487 - 43353 | 31539.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

