Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00470 | PDPJ_1_00470 | Not Available | Positive | 422353 - 423297 | Not Available |
| putative neutral zinc metallopeptidase | PDPJ_1_00471 | Not Available | Positive | 423538 - 423939 | 14583.4 |
| hypothetical protein | PDPJ_1_00472 | Not Available | Positive | 423995 - 424270 | 10458.7 |
| hypothetical protein | PDPJ_1_00473 | Not Available | Positive | 424319 - 424540 | 8291.33 |
| putative neutral zinc metallopeptidase | PDPJ_1_00474 | Not Available | Positive | 424701 - 425189 | 17959.3 |
| camp phosphodiesterase class-ii | PDPJ_1_00475 | Not Available | Positive | 425471 - 426454 | 36216.0 |
| caax amino terminal protease self- immunity | PDPJ_1_00476 | Not Available | Negative | 426582 - 427433 | 31213.6 |
| hypothetical protein | PDPJ_1_00477 | Not Available | Negative | 427634 - 427768 | 5133.46 |
| hypothetical protein | PDPJ_1_00478 | Not Available | Negative | 427945 - 428382 | 16941.7 |
| flagellin n-methylase | PDPJ_1_00479 | Not Available | Positive | 428648 - 428902 | 8967.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

